PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cotton_A_39037_BGI-A2_v1.0
Organism
Gossypium arboreum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family EIL
Protein Properties Length: 578aa    MW: 65158.1 Da    PI: 5.6855
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cotton_A_39037_BGI-A2_v1.0genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3417.21.8e-127383621312
                                 XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                        EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkp 83 
                                 +el++rmwkd+++lkr++er+k   ++++ a++++k +k+++qa+rkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkp
  Cotton_A_39037_BGI-A2_v1.0  38 DELERRMWKDRIKLKRIRERQKI--AAQQ-ALEKQKLKKTSDQAQRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKP 117
                                 79*************88888875..4455.59*************************************************** PP

                                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT CS
                        EIN3  84 vegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplek 166
                                 v+g+sd++raWW+ekv+fd+ngpaai+ky+a++l++ ++++   ++ + ++sl++lqD+tlgSLLs+lmqhcdppqr++plek
  Cotton_A_39037_BGI-A2_v1.0 118 VSGSSDNIRAWWQEKVKFDKNGPAAIAKYEADCLAMIESDNG--RNGNLQSSLKDLQDATLGSLLSSLMQHCDPPQRKYPLEK 198
                                 ***********************************9988888..68999********************************** PP

                                 --HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHH CS
                        EIN3 167 gvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsv 249
                                  ++pPWWPtG+e+ww +lgl++ q+ ppykkphdlkk+wkv+vLt+vikhmsp+ ++ir+++rqsk+lqdkm+akes+++l v
  Cotton_A_39037_BGI-A2_v1.0 199 RIPPPWWPTGNEDWWVKLGLQQGQS-PPYKKPHDLKKMWKVGVLTSVIKHMSPDTAKIRRHVRQSKCLQDKMTAKESAIWLGV 280
                                 ************************9.9******************************************************** PP

                                 HTTTTT-S--XXXXXX...........XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX..........XXXXXXXXX CS
                        EIN3 250 lnqeekecatvsahss...........slrkqspkvtlsceqkedvegkkeskikhvqavktta..........gfpvvrkrk 311
                                 l +ee+++++ s+++               +++++  +s+++++dv+g ++  +++      t+           ++ + +rk
  Cotton_A_39037_BGI-A2_v1.0 281 LAREEALIQQPSSDNGtsgvtelprlgC--SDKKQPAVSTDSDYDVDGVDDGVVSAEPVAYITNydshpvqineRVAKQPRRK 361
                                 **************44446776654321..26777778888889999444433332222222223344444433444444444 PP

                                 X CS
                        EIN3 312 k 312
                                 +
  Cotton_A_39037_BGI-A2_v1.0 362 R 362
                                 4 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048737.4E-12338285No hitNo description
Gene3DG3DSA:1.10.3180.103.3E-69161293IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167687.85E-60166288IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 578 aa     Download sequence    Send to blast
MAELEDIGAD ISSDIEVDDL RCQNIAEKDV SEEEIEADEL ERRMWKDRIK LKRIRERQKI  60
AAQQALEKQK LKKTSDQAQR KKMSRAQDGI LKYMLKLMEV CKARGFVYGI IPEKGKPVSG  120
SSDNIRAWWQ EKVKFDKNGP AAIAKYEADC LAMIESDNGR NGNLQSSLKD LQDATLGSLL  180
SSLMQHCDPP QRKYPLEKRI PPPWWPTGNE DWWVKLGLQQ GQSPPYKKPH DLKKMWKVGV  240
LTSVIKHMSP DTAKIRRHVR QSKCLQDKMT AKESAIWLGV LAREEALIQQ PSSDNGTSGV  300
TELPRLGCSD KKQPAVSTDS DYDVDGVDDG VVSAEPVAYI TNYDSHPVQI NERVAKQPRR  360
KRPNLRSSHG DQQPLPIHGD QQSSISTLPD INQTDLSFME YHMPVTQQEN YASTELRHVE  420
DGLDVQPHLP ASEYCHYPAI PTATEISTQR PMLYTLEQHE LHQGAAYEFY NQSAELRPGH  480
DSQQTLMDMN VLHVRPENGV DASAPGGNGH EIAGGELHHY VKDLLHNEQD RAVHNPFSSP  540
TSDPSFFGGF HSPFELPFDG TSSLDELLDD DLIQYFGA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A3e-721652969140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00233DAPTransfer from AT1G73730Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012451728.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein isoform X4
SwissprotO231160.0EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A2P5R3R00.0A0A2P5R3R0_GOSBA; Uncharacterized protein
STRINGEOY325340.0(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM46582548
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-162ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]