 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Cotton_A_34375_BGI-A2_v1.0 |
| Common Name | F383_25138 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
G2-like |
| Protein Properties |
Length: 337aa MW: 36412.1 Da PI: 5.0658 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cotton_A_34375_BGI-A2_v1.0 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 91.7 | 6.3e-29 | 165 | 218 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
+prl+Wtp+LH+rFv++v++L G++ A Pkti++lm+v+gLt+e+v+SHLQkYRl
Cotton_A_34375_BGI-A2_v1.0 165 RPRLVWTPQLHKRFVDVVAHL-GIKSAFPKTIMQLMNVEGLTRENVASHLQKYRL 218
59*******************.********************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 337 aa
Download sequence Send
to blast |
MGQEVKMSDF EANGGDDEEA TANAITTIVD DDDDDVEERV IEWEMGLPNC DDLTPLSQSL 60
IPPELASAFS ISPEPRRTVV DVNRASRSTL SSLRSTGAHS STTNNNNSNS NFRDTVVVEA 120
EGYGSGSGSG SDPKKMRKMD IAEEADSAVM TTENSDDPSG RTLKRPRLVW TPQLHKRFVD 180
VVAHLGIKSA FPKTIMQLMN VEGLTRENVA SHLQKYRLYL KRMQGLSNEG PSASDQLFAS 240
TPVPQSLHET GSGGGGGGGS GGGGANGNGN GHLGMAIPMS YGAPMMPVPM PMYGHVGMHQ 300
GLYHQQRQYH HQNGYEANSY GMMQQRDWSD GNRYGSQ
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 249 | 259 | TGSGGGGGGGS |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor that is essential for the generation of the circadian clock oscillation. Is necessary for activation of CCA1 and LHY expression. Is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter. Directly regulates the expression of PRR9, a major component of the morning transcriptional feedback circuit, by binding specific sites on PRR9 promoter. Binds to its own promoter, inducing a negative auto-regulatory feedback loop within the core clock. Binds to ELF3 and associates with ELF4 in a diurnal complex which is required for the expression of the growth-promoting transcription factors PIF4 and PIF5 and subsequent hypocotyl growth in the early evening. {ECO:0000269|PubMed:16006522, ECO:0000269|PubMed:16164597, ECO:0000269|PubMed:21236673, ECO:0000269|PubMed:21753751, ECO:0000269|PubMed:22311777}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Circadian oscillation with peaks at subjective dusk. {ECO:0000269|PubMed:16006522, ECO:0000269|PubMed:16164597, ECO:0000269|PubMed:17132630, ECO:0000269|PubMed:21753751}. |
