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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Cotton_A_32784_BGI-A2_v1.0 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
MYB |
| Protein Properties |
Length: 299aa MW: 32518.6 Da PI: 7.3733 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cotton_A_32784_BGI-A2_v1.0 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 63.3 | 4.8e-20 | 5 | 50 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+W++eEd+ll ++v+++G+++W++I++ ++ gR++k+c++rw +
Cotton_A_32784_BGI-A2_v1.0 5 KGPWSPEEDDLLQQLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 50
79******************************.***********985 PP
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| 2 | Myb_DNA-binding | 57.4 | 3.4e-18 | 59 | 101 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
++T+eEde +++a++++G++ W+tIar ++ gRt++ +k++w++
Cotton_A_32784_BGI-A2_v1.0 59 AFTPEEDETIIRAHARFGNK-WATIARLLN-GRTDNAIKNHWNST 101
79******************.*********.***********986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 299 aa
Download sequence Send
to blast |
MDRIKGPWSP EEDDLLQQLV QKHGPRNWSL ISKSIPGRSG KSCRLRWCNQ LSPQVEHRAF 60
TPEEDETIIR AHARFGNKWA TIARLLNGRT DNAIKNHWNS TLKRKCLPVG EECNFVANGG 120
YDGNLGGEER QPLKRSVSAG LYMSPGSPSG SDVSDSSVPV LSSSYVYKPI PRTGGVNVDV 180
NVTPAGVEAA SSSNDPPTSL SLSLPGVESC EVVSTQPITE STQNRSEERG GGVMGFSAEF 240
MAVMQEMIRV EVRNYMTQMQ QQQQQQNGAV SGGAGMGMCL DGGFRNLMAV NRVGMSKIE
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AJ459121 | 1e-70 | AJ459121.1 Gossypium hirsutum partial myb104a gene, clone pGhMYB104a. |
