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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Cotton_A_30808_BGI-A2_v1.0 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
G2-like |
| Protein Properties |
Length: 246aa MW: 28500.6 Da PI: 6.788 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cotton_A_30808_BGI-A2_v1.0 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 85.6 | 5e-27 | 188 | 237 | 2 | 51 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51
+r++W++eLH+rFvea++ LGG+e+AtPk+i++lm+v+gLt+e+vkSHLQ
Cotton_A_30808_BGI-A2_v1.0 188 NRRCWSSELHSRFVEALNMLGGIEVATPKQIRNLMQVEGLTIEQVKSHLQ 237
79************************************************ PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 246 aa
Download sequence Send
to blast |
MNPSSIELSL SLKPSYVPKS RSSLLLDLSK IDNQYYKLSV LSDYICKLEE ELARVQPFKH 60
LLPLCTLLLM EVWAHGLIDP ITYETETLKD KLLNINNEKE QREIQEECDA NLQSCKEKGN 120
NMERLMLGYK KNSTWNSVGE SSSDGKGKEV AAIDQYSWRN DNQGFMYLNN YDHHHHPKPL 180
TQPIWKNNRR CWSSELHSRF VEALNMLGGI EVATPKQIRN LMQVEGLTIE QVKSHLQVII 240
HLFMLN
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | JX582232 | 5e-72 | JX582232.1 Gossypium hirsutum clone NBRI_GE15026 microsatellite sequence. |
