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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Cotton_A_29667_BGI-A2_v1.0 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
E2F/DP |
| Protein Properties |
Length: 353aa MW: 38864.3 Da PI: 7.0132 |
| Description |
E2F/DP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cotton_A_29667_BGI-A2_v1.0 | genome | BGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | E2F_TDP | 87.3 | 1.2e-27 | 101 | 183 | 2 | 71 |
E2F_TDP 2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkeknei 67
++++Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k+ei
Cotton_A_29667_BGI-A2_v1.0 101 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpgnsvaspdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEI 179
689********...*****999*******************************************************.***** PP
E2F_TDP 68 rwkg 71
+wkg
Cotton_A_29667_BGI-A2_v1.0 180 QWKG 183
**98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0042023 | Biological Process | DNA endoreduplication |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005667 | Cellular Component | transcription factor complex |
| GO:0005737 | Cellular Component | cytoplasm |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046982 | Molecular Function | protein heterodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 353 aa
Download sequence Send
to blast |
MVSGSNHIQN HNHHENGEKN PTLGGASRSW GTTVSGQSVS TSGSVGSPSS RSEQAMATPA 60
SENTFLRLNH LDIHGDDAGS QGAVGSKKKK RGQRAVAGDK SGRGLRQFSM KVCEKVESKG 120
RTTYNEVADE LVAEFADPGN SVASPDQQQY DEKNIRRRVY DALNVLMAMD IISKDKKEIQ 180
WKGLPRTSLS DIEDLKTERL GLRNRIDKKA AYLHELEEQF VGLQNLIQRN EQLYSSGNAS 240
GGGVALPFIL VQTRPHATVE VEISEDMQLV HFDFNSTPFE LHDDNYVLKA MKFCERPQTD 300
EMAHNFSADG EGSSMSAMYQ QQILAPPRTS TPGRPPTSPP LPGILKARVK HEH
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. The complex DPB/E2FC restricts cell division and lateral root initiation and may function as a negative regulator of E2F-regulated genes. The interaction with SKP2A is controlled by auxin. {ECO:0000269|PubMed:11891240, ECO:0000269|PubMed:16920782}. |
