 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Cotton_A_26995_BGI-A2_v1.0 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
ERF |
| Protein Properties |
Length: 180aa MW: 20641.2 Da PI: 7.4383 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cotton_A_26995_BGI-A2_v1.0 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 38.5 | 2.9e-12 | 75 | 117 | 3 | 48 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48
y+GVr++ +g ++AeIrd + ng +r++lg++ t+++Aa a+++
Cotton_A_26995_BGI-A2_v1.0 75 YRGVRRRL-SGTYAAEIRDLKRNG--ARIWLGTYETPDGAALAYVE 117
9****888.8*********54454..******************86 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 180 aa
Download sequence Send
to blast |
MILIQFQDRE NPRKNELHDD AINVDQWINF DQLFDATEET DAVNNASFPS FEVSFQMETT 60
AAVPKPHAPP KKFNYRGVRR RLSGTYAAEI RDLKRNGARI WLGTYETPDG AALAYVEPVR 120
VSSKKRRSPE PLASCSWSQS PSSAWDKGTP KLKRRSEIKT EFEVDMYHLV PTEFCQTLIC
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT2G44840.1 | 2e-17 | ethylene-responsive element binding factor 13 |
