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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_26571_BGI-A2_v1.0 |
Common Name | F383_18542 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
bHLH |
Protein Properties |
Length: 302aa MW: 31946.1 Da PI: 6.7302 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_26571_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 30.3 | 7.8e-10 | 152 | 196 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
h+++Er RR+ri +++ L+el+P+ + K + a++L + v+Y+k L
Cotton_A_26571_BGI-A2_v1.0 152 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIVDYVKFL 196
99***********************55......****************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 302 aa
Download sequence Send
to blast |
MANNPNESPA DDFLEQILGL PHFAPTETGL AGPDGRLSGN ATTAGAPMHL QLSSGGGTGH 60 IGAIGGGGGG AFHGQVFPLG LSLEQGKGGF LKPEEASGSS KRFRDEVVDG RAFSVKNVFH 120 GQPVPATVAA GPHPPPMRPR VRARRGQATD PHSIAERLRR ERIAERIRAL QELVPSVNKT 180 DRAAMLDEIV DYVKFLRLQV KVLSMSRLGA AGAVAPLVTD LPLSSVEDES GEGGRSQPAW 240 EKWSNDGTER QVAKLMEEDV GAAMQFLQSK ALCVMPISLA TAIYHTQSPD TSSVVKPETN 300 PP
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Functional Description ? help
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Source |
Description |
UniProt | Required for ovule fertilization. {ECO:0000269|PubMed:15634699}. |