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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cotton_A_26312_BGI-A2_v1.0 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
ERF |
Protein Properties |
Length: 325aa MW: 36625 Da PI: 8.6318 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_26312_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.4 | 1e-19 | 182 | 232 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp+ +g r++lg+f+ta eAaka+++a+ kl g
Cotton_A_26312_BGI-A2_v1.0 182 HYRGVRQRP-WGKFAAEIRDPTRRG--SRIWLGTFDTAIEAAKAYDRAAFKLLG 232
7********.**********97665..************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 325 aa
Download sequence Send
to blast |
METSSEISTA LQYIQHYLLD ELSPVGLGNF SNENRWINEV KAGVSTSQPE SLYSQTSSSG 60 SSLAESNFNC LENNDFFKFS PNFRGFQPHR SDVFEYESKP QIIDLITPKS FPSNASSLEF 120 ETKPQITELS TAKPQVSSGC NSKIRKPSLK ISLPHKVEWI QFDKPDLTRP KLKKSNSEDN 180 RHYRGVRQRP WGKFAAEIRD PTRRGSRIWL GTFDTAIEAA KAYDRAAFKL LGSKAILNFP 240 LEAGKLESAA SDGERKRSRD NSEGEEKRAK VVKRESENVT KARDNGDAPL TPSNWTAFWD 300 LDNEIKEIFN VPLLSPLGFS HVMVV
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