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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_25722_BGI-A2_v1.0 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
ERF |
Protein Properties |
Length: 334aa MW: 36228.7 Da PI: 6.4227 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_25722_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 67 | 3.7e-21 | 121 | 170 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrd + + +r++lg+f+tae+Aa+a+++a+++++g
Cotton_A_25722_BGI-A2_v1.0 121 RYRGVRQRP-WGKWAAEIRDpF-----KaARVWLGTFDTAEDAARAYDEAALRFRG 170
7********.**********66.....56*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0006970 | Biological Process | response to osmotic stress |
GO:0009749 | Biological Process | response to glucose |
GO:0009788 | Biological Process | negative regulation of abscisic acid-activated signaling pathway |
GO:0050832 | Biological Process | defense response to fungus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 334 aa
Download sequence Send
to blast |
MSVMVSALTH VVAGDVPADD EELSGNEYLD WRSNNINPSL GFGGLKRGRE EVDGCATGSG 60 GGGRMAVESV ANLCSQFVHL PHGGSSSAVA GVREANTPAQ LVPTYEYNSN ENNNREEPRR 120 RYRGVRQRPW GKWAAEIRDP FKAARVWLGT FDTAEDAARA YDEAALRFRG NKAKLNFPEN 180 VKLRSVPPNQ TATHFPISDS PNTLFSIPTS TDPIIHHSQS HYLVPNPQVA GGYLDYSQLV 240 LGSSTSSVPR EQQLQQLRQN QPIYPYDRTV LSSSESSQAQ SSSLSSSSPA SPPTSYPIVF 300 PLQASGYQFN LGNSSQGGGI GDFSVHSWSS DSNH
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KP259809 | 0.0 | KP259809.1 Gossypium barbadense ethylene-responsive element binding protein mRNA, complete cds. |