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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Cotton_A_25525_BGI-A2_v1.0 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
G2-like |
| Protein Properties |
Length: 342aa MW: 39139.2 Da PI: 9.7455 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cotton_A_25525_BGI-A2_v1.0 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 106 | 2.1e-33 | 71 | 124 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWtp+LH++Fv+ave+LGG+++AtPk +l++m+vkgLt++hvkSHLQ+YR+
Cotton_A_25525_BGI-A2_v1.0 71 PRLRWTPDLHQCFVHAVERLGGEDRATPKMVLQIMDVKGLTISHVKSHLQMYRS 124
8****************************************************7 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 342 aa
Download sequence Send
to blast |
MKRVDVGSCW LKGCCSSSSS LDDSGGISVY SPSPSMMRVM RRRHHKDDNL QLPEISLKSP 60
IVRPYVRSKM PRLRWTPDLH QCFVHAVERL GGEDRATPKM VLQIMDVKGL TISHVKSHLQ 120
MYRSTKHEQM IQEAATASRR NEKVLELMNC PQNQQFKDQV RPYNLGLGIE GMPSCTIYRQ 180
PQWYIYLYVF VYLYLYPVLL YLHLILRSQK KRVSLNLSSE NVYIETFLHI CRNGNKVSNQ 240
LSYGELTNKG SEQRSSTSYI IFKDLLKSCT IPENREKVNV GQHGGADWKC NHQKLVKLGD 300
HSQASDCSIC RSLKSKVSQK MSRHGKAETL GLNDVSLELS LA
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 2e-19 | 72 | 127 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 2e-19 | 72 | 127 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 2e-19 | 72 | 127 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 2e-19 | 72 | 127 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 2e-19 | 72 | 127 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 2e-19 | 72 | 127 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 2e-19 | 72 | 127 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 2e-19 | 72 | 127 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | JX578495 | 1e-115 | JX578495.1 Gossypium hirsutum clone NBRI_GE10535 microsatellite sequence. |
