 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Cotton_A_24596_BGI-A2_v1.0 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
C2H2 |
| Protein Properties |
Length: 233aa MW: 25197.9 Da PI: 8.4883 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cotton_A_24596_BGI-A2_v1.0 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 13.5 | 0.00021 | 85 | 107 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
ykC+ C+k F++ L H +H
Cotton_A_24596_BGI-A2_v1.0 85 YKCSVCDKAFPSYQALGGHKASH 107
9***********99999998887 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 233 aa
Download sequence Send
to blast |
MALEALNSPT MPTPFTNKYD DIDNWKKGKR SKRLRTDSPT TPTTEEEYLA LCLIMLARGS 60
PQGAAHHHPH SSSSSAHPLH LNLSYKCSVC DKAFPSYQAL GGHKASHRKP STAQNPSITT 120
ETNAAGSSGR GRSHEFPIAH KSSPTGQALG GHKRCHYEGG NNNSSSYKSG SVSGVTLSDG 180
GALSQSHRLN FDFDLNMPAC EENEDGRFGQ IYAEQEVESP LPTKKPHVLM VKA
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | JQ837702 | 0.0 | JQ837702.1 Gossypium hirsutum cultivar ZM3 ZFP mRNA, complete cds. |
