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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_17105_BGI-A2_v1.0 |
Common Name | F383_01488 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
AP2 |
Protein Properties |
Length: 351aa MW: 39710.5 Da PI: 7.1409 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_17105_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 35.5 | 2.5e-11 | 43 | 99 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
s y+GV++++++gr++A+++d ++n ++k+ + g + +e Aa a++ a++k++g
Cotton_A_17105_BGI-A2_v1.0 43 STYRGVTRHRWTGRFEAHLWDkNCWNEsQNKKGRQGAYADEEAAAHAYDLAALKYWG 99
56*******************99998898877777999998**************98 PP
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2 | AP2 | 52.3 | 1.4e-16 | 142 | 193 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g
Cotton_A_17105_BGI-A2_v1.0 142 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAAMAYDMAAIEYRG 193
89****99**********99966...3.6*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009651 | Biological Process | response to salt stress |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0010187 | Biological Process | negative regulation of seed germination |
GO:0040008 | Biological Process | regulation of growth |
GO:0045723 | Biological Process | positive regulation of fatty acid biosynthetic process |
GO:1901959 | Biological Process | positive regulation of cutin biosynthetic process |
GO:0005634 | Cellular Component | nucleus |
GO:0000981 | Molecular Function | RNA polymerase II transcription factor activity, sequence-specific DNA binding |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 351 aa
Download sequence Send
to blast |
MAKISHQNQK NGSDNEKTAA QPTTKLKRTR KTVPRHSPPQ RSSTYRGVTR HRWTGRFEAH 60 LWDKNCWNES QNKKGRQGAY ADEEAAAHAY DLAALKYWGQ DTVLNFPLST YEKELKEMES 120 QSKEEYIGSL RRKSSGFARG VSKYRGVARH HHNGRWEARI GRVFGNKYLY LGTYATQEEA 180 AMAYDMAAIE YRGLNAVTNF DLSRYIDWLH PNDQSDSNNS SNPQQNFNGD TNSTPSPNHD 240 TKLEISIQSQ TYCTSETRLN DSNSNGSSSS ASSALGHLLK SSKIKEMLDR TSEAACPSTP 300 PEPNVPRRSF PDYIQTYFDC QDSSSYTEDD DIIFGDLDSL AIPMFHCELD G
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |