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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Cotton_A_15020_BGI-A2_v1.0 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
G2-like |
| Protein Properties |
Length: 394aa MW: 43825.1 Da PI: 6.8791 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cotton_A_15020_BGI-A2_v1.0 | genome | BGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 101.3 | 6.1e-32 | 34 | 88 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprl+Wtp+LHe F+ea +qLGG++kAtPkt+++lm+++gLtl+h+kSHLQkYRl
Cotton_A_15020_BGI-A2_v1.0 34 KPRLKWTPDLHEXFIEAANQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 88
79****************************************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 394 aa
Download sequence Send
to blast |
YQHQGKNIHP ERHLFLQGGN GPGDSGLVLS TDAKPRLKWT PDLHEXFIEA ANQLGGADKA 60
TPKTVMKLMG IPGLTLYHLK SHLQKYRLSK NLHGQANNGS NKIGKMTVFP FSAVAMAGDR 120
MSEATGTHMN NLSIGPQTNK GLQIGEALQM QIEVQRRLHE QLEVQRHLQL RIEAQGKYLQ 180
AVLEKAQETL GRQNLGNMGL EAAKVQLSEL VSKVSNQCLN SAFPDLKDLQ GLCPQQGQTQ 240
ATPPTDCSMD SCLTSCDGSQ KEQEIHNNGI CLRTYNSTSF MEQRDHVLED RLLPQTELKP 300
FTDMKLGNDA ERRMFFADRS TSDLSMSVGL QGEKGHGSFS EGKFNGRNED QEGFKLQTVN 360
RLPYFETKLD LNVHEENDAA SSCKQFDLNG LSWN
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 2e-21 | 34 | 90 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 2e-21 | 34 | 90 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 2e-21 | 34 | 90 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 2e-21 | 34 | 90 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that may activate the transcription of specific genes involved in nitrogen uptake or assimilation (PubMed:15592750). Acts redundantly with MYR1 as a repressor of flowering and organ elongation under decreased light intensity (PubMed:21255164). Represses gibberellic acid (GA)-dependent responses and affects levels of bioactive GA (PubMed:21255164). {ECO:0000269|PubMed:21255164, ECO:0000305|PubMed:15592750}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by nitrogen deficiency. {ECO:0000269|PubMed:15592750}. |
