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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cotton_A_14914_BGI-A2_v1.0 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
bHLH |
Protein Properties |
Length: 235aa MW: 27305.2 Da PI: 6.8828 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_14914_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 31.4 | 3.5e-10 | 28 | 75 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksL 54
+++E++RR+++++ ++ L +llP++ +sk ls + +Av+YI sL
Cotton_A_14914_BGI-A2_v1.0 28 RKIIEKNRRNHMKNLYASLNSLLPHR---NSKElLSLPDQIDEAVNYITSL 75
589**********************9...88888**************998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 235 aa
Download sequence Send
to blast |
MELQMEYLAV DKQIEKQRAR CSSAKIERKI IEKNRRNHMK NLYASLNSLL PHRNSKELLS 60 LPDQIDEAVN YITSLKTRMN ESREKKESLM RRKRSYTCAD TITSETTARS KSPEIKMNEN 120 GSAMEVVLTT GKDSQFMFYE MIYILHQHGA QVLNASFSIL GNTVFHIVHA EIGAFVGAQI 180 IKDKLNKLVK GSSCEEELQQ ELWDYQIHPE TWDLNYEIYP ETWDFPIMLG STYMP
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