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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_14392_BGI-A2_v1.0 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
WRKY |
Protein Properties |
Length: 332aa MW: 37342.8 Da PI: 5.8062 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_14392_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 89.9 | 2e-28 | 110 | 170 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
dDg++WrKYGqK + gs+fpr+YYrCt++ gC + k+v++s++dp+++e++Y+g+H+++
Cotton_A_14392_BGI-A2_v1.0 110 DDGFCWRKYGQKAILGSNFPRGYYRCTHRhsqGCLAIKQVQKSNDDPTIFEVKYKGRHTCN 170
8***************************98999**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0048527 | Biological Process | lateral root development |
GO:0005730 | Cellular Component | nucleolus |
GO:0000987 | Molecular Function | core promoter proximal region sequence-specific DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 332 aa
Download sequence Send
to blast |
MKQEALLNEL KEGREVTNLL MKHLHLPSSH QTRLVLIEKI LGSYENALSI LNCNGLVVET 60 KPSLSTMESL PSIDHSSPDK RDVYKKRKTS SGWTEQLRVC SGTSLDNPID DGFCWRKYGQ 120 KAILGSNFPR GYYRCTHRHS QGCLAIKQVQ KSNDDPTIFE VKYKGRHTCN QTSHFAATYV 180 SVSTESENEG NYSRKRQHQL EAKQKQAQQA FSSFGSGLMV KTEDLDNRED IFPSFPFPVE 240 SEQVKNGSFV EALMENDIMG NISPAFISPA TSESNYFSMS PCHMGCFESD LTDIISAPTS 300 VTNSPIGDLD ISSLDKLEFD PSFPFDNPEF FY
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF031111 | 0.0 | KF031111.1 Gossypium hirsutum WRKY transcription factor 90 (WRKY90) mRNA, complete cds. |