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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Cotton_A_14372_BGI-A2_v1.0 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
ERF |
| Protein Properties |
Length: 297aa MW: 33977.8 Da PI: 4.5543 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cotton_A_14372_BGI-A2_v1.0 | genome | BGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 60.4 | 4.1e-19 | 116 | 165 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y GVr+++ +grW+AeIrdp++ r+r++lg+++taeeAa +++a+ +++g
Cotton_A_14372_BGI-A2_v1.0 116 KYLGVRQRP-WGRWAAEIRDPTS---RTRVWLGTYDTAEEAALVYDRAAIQIKG 165
799******.**********965...4**********************99887 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 297 aa
Download sequence Send
to blast |
MNPGSPLRVK YREQRTVTKK LVKPSSEWFC MESKAKAPKI VRICVTDEDA TDSSSDECEG 60
ETYHTVKRHV NEIRIQDCST VNFTKPTNHQ INNKSNHVDI RSKKQQQQQC LSVGVKYLGV 120
RQRPWGRWAA EIRDPTSRTR VWLGTYDTAE EAALVYDRAA IQIKGPDAVT NFAQPPLRPD 180
IDLDIISGYD CGQESQSLCS PTFVLRFQTN EEAELQIQSK DDSFEHGWKL EEDLPGQPTS 240
LSDEYLLTDT TVALCDYFNS DNPEPIFFDE MRLAEENISV KLDIDFGACT WEVDDYY
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