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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Cotton_A_11761_BGI-A2_v1.0 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
G2-like |
| Protein Properties |
Length: 76aa MW: 8772.34 Da PI: 10.7373 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cotton_A_11761_BGI-A2_v1.0 | genome | BGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 88.7 | 5.5e-28 | 15 | 67 | 1 | 53 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53
kprl+Wtp+LH+rFveav+q GG++kAt k+++++m++ gLtl+h+kSHLQ +
Cotton_A_11761_BGI-A2_v1.0 15 KPRLKWTPQLHQRFVEAVNQVGGADKATLKSLMRIMGISGLTLYHLKSHLQAF 67
79*************************************************87 PP
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 9e-20 | 15 | 67 | 2 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 9e-20 | 15 | 67 | 2 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 8e-20 | 15 | 67 | 1 | 53 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 8e-20 | 15 | 67 | 1 | 53 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 8e-20 | 15 | 67 | 1 | 53 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 8e-20 | 15 | 67 | 1 | 53 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 9e-20 | 15 | 67 | 2 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 9e-20 | 15 | 67 | 2 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 9e-20 | 15 | 67 | 2 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 9e-20 | 15 | 67 | 2 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 9e-20 | 15 | 67 | 2 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 9e-20 | 15 | 67 | 2 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that may activate the transcription of specific genes involved in nitrogen uptake or assimilation (PubMed:15592750). Acts redundantly with MYR1 as a repressor of flowering and organ elongation under decreased light intensity (PubMed:21255164). Represses gibberellic acid (GA)-dependent responses and affects levels of bioactive GA (PubMed:21255164). {ECO:0000269|PubMed:21255164, ECO:0000305|PubMed:15592750}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by nitrogen deficiency. {ECO:0000269|PubMed:15592750}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | JX614276 | 3e-52 | JX614276.1 Gossypium hirsutum clone NBRI_GE57551 microsatellite sequence. |
