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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Cotton_A_11128_BGI-A2_v1.0 |
| Common Name | F383_29826 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
G2-like |
| Protein Properties |
Length: 471aa MW: 50893.5 Da PI: 7.0814 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cotton_A_11128_BGI-A2_v1.0 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 101.3 | 6.2e-32 | 250 | 305 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
Cotton_A_11128_BGI-A2_v1.0 250 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVEGLTNDEVKSHLQKYRLH 305
68****************************************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009266 | Biological Process | response to temperature stimulus |
| GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
| GO:0010452 | Biological Process | histone H3-K36 methylation |
| GO:0048579 | Biological Process | negative regulation of long-day photoperiodism, flowering |
| GO:1903507 | Biological Process | negative regulation of nucleic acid-templated transcription |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 471 aa
Download sequence Send
to blast |
MASPTGLTLD CKPHSYSMLL KSFGDQQIDQ TQKLEDFLGR LEEERLKIDA FKRELPLCMQ 60
LLTNAVEASR QQLHACRANQ GSRPVLEEFI PLKNSSSENS DKSQNISDKA NWMTSAQLWS 120
QAGNETKPPQ SSVASPKEAD IGFNVSPKLG LDTKQRNGGA FLPFSKDRNN PCPGSTLQPL 180
PDLALASMNE DMDDKKCSEA ENGCQRRENS GKTGNGGALV EQGKGTSCNA AEGQTTNGNT 240
NTNTGQPHRK ARRCWSPDLH RRFVNALQML GGSQVATPKQ IRELMKVEGL TNDEVKSHLQ 300
KYRLHTRRPS PSPQAPGAPA PQLVVLGGIW VSPEYATAAA AAHGGAPTLY GAHHPVASHA 360
PPPHFCASPV PQEFYSTTAT PASTPPPQLH HHTLQQQLHM YKSTSQAHSL PESDVRGAGD 420
RSESIEDGKS ESSSWKGESG ENGGGADQRK GLAALREDGE ESNGSEITLK F
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 1e-14 | 250 | 303 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 1e-14 | 250 | 303 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 1e-14 | 250 | 303 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 1e-14 | 250 | 303 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor acting as a flowering repressor, directly repressing FT expression in a dosage-dependent manner in the leaf vasculature. {ECO:0000269|PubMed:25132385}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by SVP. Down-regulated by high temperature and gibberellic acid treatment. Not regulated by photoperiod, circadian rhythm under long days or vernalization. {ECO:0000269|PubMed:25132385}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | JX615064 | 2e-32 | JX615064.1 Gossypium hirsutum clone NBRI_GE58863 microsatellite sequence. |
