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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cotton_A_10947_BGI-A2_v1.0 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
TCP |
Protein Properties |
Length: 338aa MW: 35365.3 Da PI: 9.539 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_10947_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 117 | 2.4e-36 | 69 | 166 | 3 | 103 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasn 84
+k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++ + + +
Cotton_A_10947_BGI-A2_v1.0 69 PKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMsV--NGTLKIPT 149
799************************************************************7777744421..11111111 PP
TCP 85 sssgkaaksaakskksqks 103
s +a+++ ++k++++
Cotton_A_10947_BGI-A2_v1.0 150 TS--NANPEPGDPSKKKHK 166
11..111222211111111 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 338 aa
Download sequence Send
to blast |
MAAIHKLEAE EDADPRAVVL SISGGGDAAP SKNPKEEPDI DTTLGAMPVA VHVPSGVPVP 60 PVTAAPAGPK RASTKDRHTK VEGRGRRIRI PATCAARIFQ LTRELGHKSD GETIRWLLEH 120 AEPAIIAATG TGTVPAIAMS VNGTLKIPTT SNANPEPGDP SKKKHKRPAN SEYVDINDAV 180 SVSSGLAPVI TPQQQQQQQA AVLPQGLVPI WAIPSNTVVP GAFFMVPPMA SMAGPSTQPH 240 IFTFPATATP VINISARPIS SFVSALQAAT PSQLQSNVAV TSCTVPVSKA AKTTSVMAPS 300 SSSAASATTT TTTQMLRDFS LEIYDKQELQ FMTRSSKH
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