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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Cotton_A_09733_BGI-A2_v1.0 |
| Common Name | F383_22929 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
G2-like |
| Protein Properties |
Length: 372aa MW: 41735.5 Da PI: 8.8901 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cotton_A_09733_BGI-A2_v1.0 | genome | BGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 102 | 3.7e-32 | 193 | 246 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
Cotton_A_09733_BGI-A2_v1.0 193 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 246
9****************************************************7 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 372 aa
Download sequence Send
to blast |
MDFFPAQPDL SLQISPPNSK PTSRGLDSRS SMSSMAKPDN CFELSFSNPR VSDSNSNHFH 60
QLLQNGSATA NCNGNLFQSY HHNQFPHHHN QLQHPLLYQH QHQHQQHQQG LGQEFGFLRP 120
IRGIPVYQNP PPPPSSPPFP FAQQPLDSSL PSSPSYLATT KIGNTSLNPF QSQGLMRSRF 180
MSRFPAKRSM RAPRMRWTTT LHARFVHAVE LLGGHERATP KSVLELMDVK DLTLAHVKSH 240
LQMYRTVKTT DRAAASSGQM DAFENGSSGD TSEDMMFDIQ NPRRSEISVQ QGRSSSSNAH 300
QDKEYHGLWS NSSREAWLHG KPNDSPLNLP SLQKDMDPKC LSYERISDVS SSSLSETCSK 360
KPNLEFTLGV PH
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 6e-17 | 194 | 248 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 6e-17 | 194 | 248 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 6e-17 | 194 | 248 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 6e-17 | 194 | 248 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 6e-17 | 194 | 248 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 6e-17 | 194 | 248 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 6e-17 | 194 | 248 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 6e-17 | 194 | 248 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 6e-17 | 194 | 248 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 6e-17 | 194 | 248 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 6e-17 | 194 | 248 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 6e-17 | 194 | 248 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor that regulates lateral organ polarity. Promotes abaxial cell fate during lateral organd formation. Functions with KAN1 in the specification of polarity of the ovule outer integument. {ECO:0000269|PubMed:11525739, ECO:0000269|PubMed:15286295, ECO:0000269|PubMed:16623911, ECO:0000269|PubMed:17307928}. |
