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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_08159_BGI-A2_v1.0 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
ERF |
Protein Properties |
Length: 301aa MW: 33561.9 Da PI: 8.5346 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_08159_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.8 | 3.2e-19 | 110 | 160 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr++ +g+WvAeIr p + r r++lg+++tae Aa a+++a+ kl+ge
Cotton_A_08159_BGI-A2_v1.0 110 LYRGVRQRQ-WGKWVAEIRLPQN---RVRVWLGTYDTAETAAYAYDRAAYKLRGE 160
59****999.**********954...5**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 301 aa
Download sequence Send
to blast |
MQEIYHPFGF KNGVDIGSSL SQIILSGGSN TLDSVFSHCA SLPTAIATNS VYEPLGSSVY 60 LRQRDLLQNF CHENKGNPSF SGKSVKGSLQ NCPNPPSTTD YLSPPQKKKL YRGVRQRQWG 120 KWVAEIRLPQ NRVRVWLGTY DTAETAAYAY DRAAYKLRGE YARLNFPNTK DLSELGFADC 180 AKLNALKNTV DAKVQAICQK VKREKARKKA KRSPEAEKQA KVPEPCSSSS LLSPAVFSEN 240 LSNEWPSPPV SEDGFWRCAN SPSSVLNDYP SMITEEPMFE DCSLSRMLSF DADLLWEILA 300 N
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |