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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Cotton_A_07377_BGI-A2_v1.0 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
ERF |
| Protein Properties |
Length: 306aa MW: 33960.1 Da PI: 6.9474 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cotton_A_07377_BGI-A2_v1.0 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 60.5 | 3.9e-19 | 157 | 206 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
++GVr+++ +g+WvAeIr p++ r+r++lg+f+tae Aa a++ a+ l+ge
Cotton_A_07377_BGI-A2_v1.0 157 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEAAAMAYDTAAYILRGE 206
8******9.**********955...5************************9997 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 306 aa
Download sequence Send
to blast |
METFMNKDWP SFCYGMATTG STFFNNPIIW GSSSSEETPG SNLLKNVPGF INQDINHGFN 60
PINQAQPSPS MATTMSQFPD LTSLFGPSKP VIDPINENPP LQTPQQWLRI NQSFTNDQSK 120
GFSDYWLSTT KTHPMKYSGR RFQNQHQKGY SSPGKLFRGV RQRHWGKWVA EIRLPRNRTR 180
VWLGTFDTAE AAAMAYDTAA YILRGECAQL NFPDLKDQVM ANSLNGNTAA ILGAKLQALS 240
QGSTVNKKSD LDTTTTMPAE DGVSGLNRNT TKNMEALSSD VDGVQLSRLP SMDMDIIWDA 300
LLVSDS
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | JX614788 | 1e-116 | JX614788.1 Gossypium hirsutum clone NBRI_GE58430 microsatellite sequence. |
