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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_06640_BGI-A2_v1.0 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
ERF |
Protein Properties |
Length: 300aa MW: 34036.2 Da PI: 6.9681 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_06640_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.1 | 1.2e-19 | 45 | 95 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++y+GVr++ +g+WvAeIr+p++ r+r +lg+f taeeAa a++ a+++l+g
Cotton_A_06640_BGI-A2_v1.0 45 CQYRGVRQRT-WGKWVAEIREPKK---RTRLWLGSFATAEEAAMAYDDAARRLYG 95
68*****999.**********965...5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 300 aa
Download sequence Send
to blast |
MVPHLHSLTN SLTHLLLMDS YKRSPLKPWK KGPTRGKGGP QNASCQYRGV RQRTWGKWVA 60 EIREPKKRTR LWLGSFATAE EAAMAYDDAA RRLYGPEAYL NLPHLRRIPT TTTTNLSNKS 120 STHKFKWIPS NNFVSMFPSS SPGLLNINAQ PSVHVIHQRL QELNNNGVLK TKTDTQSKNI 180 ADDVQMKEKD VVGVSSDKPQ IDLHEFLQQL GIKKDEKKQC EEEAVVNNND DAESTSTAMD 240 STMKDYYDEL VPFGENSSFN WDTMIEMHGG VDGFHGVEAS FQVHDHGYEE DLAFPTIWNF
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity-inducible transcription. {ECO:0000269|PubMed:11798174}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By high-salt stress. {ECO:0000269|PubMed:11798174}. |