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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_06049_BGI-A2_v1.0 |
Common Name | F383_12674 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
NF-YA |
Protein Properties |
Length: 290aa MW: 31526.4 Da PI: 8.9513 |
Description |
NF-YA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_06049_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | CBFB_NFYA | 99 | 4.9e-31 | 141 | 197 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
de++YVNaKQy +Il+RRq Rakle+++kl +k rkpylheSRh hAl+R+Rg+gGrF
Cotton_A_06049_BGI-A2_v1.0 141 DETIYVNAKQYGAILRRRQYRAKLEAQNKL-IKVRKPYLHESRHLHALKRARGNGGRF 197
699***************************.**************************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0016602 | Cellular Component | CCAAT-binding factor complex |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 290 aa
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to blast |
MGIVPQHFHN AKQLSFQFQD QDSSSTQSTG QSYPEAASVG DSNLYGQSSI SASSGGNETP 60 GKLVEHHAKL ASSMGTQEYV FSPSQVDYSK SIQTHIPLHC AEPYFGGAVT AVCPPPAMSH 120 HPCMLAMLPA RVPLPLALTE DETIYVNAKQ YGAILRRRQY RAKLEAQNKL IKVRKPYLHE 180 SRHLHALKRA RGNGGRFLNT KKLQESKPIP TSHGLDASRS PQLHLCANMS NQLENYKDAA 240 STTTCSDVTS ASNGDEMLQQ RDFRFSGYSS LIAGAMRGSG GNLHHLSGCG
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Functional Description ? help
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Source |
Description |
UniProt | Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. {ECO:0000250}. |