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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cotton_A_05740_BGI-A2_v1.0 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
NAC |
Protein Properties |
Length: 170aa MW: 20569.8 Da PI: 9.409 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_05740_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 100.3 | 2.8e-31 | 20 | 147 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyatgkrknratks 80
lp G+rF P+d+el+++yL +k++g +l++ +vik++d y+++P ++ k+ +++e y+F+k+++ ++ +r +r t++
Cotton_A_05740_BGI-A2_v1.0 20 LPIGYRFVPRDHELISFYLFNKIKGFQLPF-DVIKNIDFYYLDPFHFSpCefKHGRKNNEAYYFTKTKEIRSKMDRIERHTRN 101
699***************************.99**************64423444566799********************** PP
NAM 81 gyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
gyWk+ gk +e+++ +++ +glk+ +vf+ r p+ +Wvmhe+++
Cotton_A_05740_BGI-A2_v1.0 102 GYWKSCGKAEEIKH-RDRIIGLKRLFVFH-WRIPELGFGKWVMHEFSI 147
**************.8999**********.78888899********86 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 170 aa
Download sequence Send
to blast |
MAEALVSDDS FLDEYENKAL PIGYRFVPRD HELISFYLFN KIKGFQLPFD VIKNIDFYYL 60 DPFHFSPCEF KHGRKNNEAY YFTKTKEIRS KMDRIERHTR NGYWKSCGKA EEIKHRDRII 120 GLKRLFVFHW RIPELGFGKW VMHEFSIHPT FLVPHPLLDE KIKAKVYLYI
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