 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Cotton_A_05740_BGI-A2_v1.0 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
NAC |
| Protein Properties |
Length: 170aa MW: 20569.8 Da PI: 9.409 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cotton_A_05740_BGI-A2_v1.0 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 100.3 | 2.8e-31 | 20 | 147 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyatgkrknratks 80
lp G+rF P+d+el+++yL +k++g +l++ +vik++d y+++P ++ k+ +++e y+F+k+++ ++ +r +r t++
Cotton_A_05740_BGI-A2_v1.0 20 LPIGYRFVPRDHELISFYLFNKIKGFQLPF-DVIKNIDFYYLDPFHFSpCefKHGRKNNEAYYFTKTKEIRSKMDRIERHTRN 101
699***************************.99**************64423444566799********************** PP
NAM 81 gyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
gyWk+ gk +e+++ +++ +glk+ +vf+ r p+ +Wvmhe+++
Cotton_A_05740_BGI-A2_v1.0 102 GYWKSCGKAEEIKH-RDRIIGLKRLFVFH-WRIPELGFGKWVMHEFSI 147
**************.8999**********.78888899********86 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 170 aa
Download sequence Send
to blast |
MAEALVSDDS FLDEYENKAL PIGYRFVPRD HELISFYLFN KIKGFQLPFD VIKNIDFYYL 60
DPFHFSPCEF KHGRKNNEAY YFTKTKEIRS KMDRIERHTR NGYWKSCGKA EEIKHRDRII 120
GLKRLFVFHW RIPELGFGKW VMHEFSIHPT FLVPHPLLDE KIKAKVYLYI
|
