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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_04469_BGI-A2_v1.0 |
Common Name | F383_33942 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
bHLH |
Protein Properties |
Length: 199aa MW: 23467.9 Da PI: 8.7723 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_04469_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 37.5 | 4.2e-12 | 12 | 61 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+++E++RR+++++ ++ L +llP++ ++++ ls + + +Av+YIk Lq
Cotton_A_04469_BGI-A2_v1.0 12 ERKIIEKNRRNHMKNLYSMLNSLLPHQ--NSKEPLSLPDQVDEAVKYIKRLQ 61
5789**********************6..26666*****************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 199 aa
Download sequence Send
to blast |
MKRSRCSSAK VERKIIEKNR RNHMKNLYSM LNSLLPHQNS KEPLSLPDQV DEAVKYIKRL 60 QTKLKESRER KESLMGRTRS YKCTQSNDST KPAEIRINEK GSAMEVALMT GPGSQYMFYE 120 MIRIFHEDGA HVLNANFWVV GNTIFHIVHA EIGEFGVAKI IKEKLNKFVN EDRCREEELE 180 QELYWDYEIP PETWNFHIM
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