 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cotton_A_03591_BGI-A2_v1.0 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
Family |
ERF |
Protein Properties |
Length: 181aa MW: 20720.7 Da PI: 4.5212 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_03591_BGI-A2_v1.0 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.9 | 2.8e-19 | 13 | 63 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++y+GVr ++ +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++aa + +g
Cotton_A_03591_BGI-A2_v1.0 13 CKYRGVRMRS-WGKWVSEIREPKK---NSRIWLGTFPTAEMAARAHDAASIAVKG 63
79*****998.**********976...4********************9776655 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 181 aa
Download sequence Send
to blast |
MKPNASNNRE KSCKYRGVRM RSWGKWVSEI REPKKNSRIW LGTFPTAEMA ARAHDAASIA 60 VKGESAYLNF PELAHQLPRP ATCSHTDIQK AANEAAYGNG NGMVGEEEEE EEEEEEERFE 120 REATSSTTMS SEDSDLSMWF DLPDLSLEPD GTHHRFGFNS WWQHEQAGIH TDFQFEETMM 180 E
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | JX616573 | 1e-127 | JX616573.1 Gossypium hirsutum clone NBRI_GE61335 microsatellite sequence. |