PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cotton_A_02559_BGI-A2_v1.0 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | EIL | ||||||||
Protein Properties | Length: 363aa MW: 40688.2 Da PI: 8.5719 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 386.5 | 3.8e-118 | 38 | 305 | 1 | 275 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkp 83 +el++rmwkd ++l+r+ker++ + +a++ n+++e arrkk+sraQDgiLk Ml mev+na+GfvYgi+pekgk Cotton_A_02559_BGI-A2_v1.0 38 DELERRMWKDSVRLRRIKERERVAA--Q----QAAELNQTSELARRKKISRAQDGILKNMLMLMEVYNARGFVYGIVPEKGKA 114 79******************99743..3....3456789******************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT CS EIN3 84 vegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplek 166 v+gasd+LraWWkekv+fd+ngpaai+ky+a++l++s ++++ ++ + +sl++lqD+t+gSLLs+lmqhcdppqr++plek Cotton_A_02559_BGI-A2_v1.0 115 VSGASDNLRAWWKEKVNFDKNGPAAIVKYEAECLAMSVSDRN--RNGNPCSSLQDLQDATIGSLLSTLMQHCDPPQRKYPLEK 195 ************************************988877..6789999******************************** PP --HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHH CS EIN3 167 gvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsv 249 ++pPWWPtG+e+ww +lgl++ + ppykkphdlkk+wkv+vLtavikhmsp+i++ir++++qsk+lq k +akes+++l v Cotton_A_02559_BGI-A2_v1.0 196 RIPPPWWPTGNEDWWVKLGLQRGDS-PPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVLQSKCLQGKLTAKESAIWLGV 277 *********************9998.9******************************************************** PP HTTTTT-S--XXXX..XX.....XXXXXXXXXX CS EIN3 250 lnqeekecatvsah..ss.....slrkqspkvt 275 l++ee++++t s s+ s ++v+ Cotton_A_02559_BGI-A2_v1.0 278 LGREEALIRTSSITeiSRgghadS-----NDVV 305 ********9998886544443331.....3222 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 2.6E-114 | 38 | 282 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 2.9E-67 | 161 | 288 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 2.48E-59 | 164 | 285 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 363 aa Download sequence Send to blast |
MAELDDTGGD ISWDIEVSEL KCDNMGEEDV SDEEIGADEL ERRMWKDSVR LRRIKERERV 60 AAQQAAELNQ TSELARRKKI SRAQDGILKN MLMLMEVYNA RGFVYGIVPE KGKAVSGASD 120 NLRAWWKEKV NFDKNGPAAI VKYEAECLAM SVSDRNRNGN PCSSLQDLQD ATIGSLLSTL 180 MQHCDPPQRK YPLEKRIPPP WWPTGNEDWW VKLGLQRGDS PPYKKPHDLK KMWKVGVLTA 240 VIKHMSPDIA KIRRHVLQSK CLQGKLTAKE SAIWLGVLGR EEALIRTSSI TEISRGGHAD 300 SNDVVGNQIG SVSSKNNGRN QLTDAEPVAL IGNDDAPLVQ EDVPVEKQSR RKRPRLRSSC 360 GGR |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wij_A | 3e-71 | 165 | 288 | 12 | 135 | ETHYLENE-INSENSITIVE3-like 3 protein |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 350 | 356 | RKRPRLR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017650138.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Swissprot | O23116 | 1e-147 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | A0A2P5WSF1 | 0.0 | A0A2P5WSF1_GOSBA; Uncharacterized protein | ||||
STRING | Gorai.013G250300.1 | 0.0 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM4658 | 25 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 1e-147 | ETHYLENE-INSENSITIVE3-like 3 |
Publications ? help Back to Top | |||
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