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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Cotton_A_02500_BGI-A2_v1.0 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
G2-like |
| Protein Properties |
Length: 271aa MW: 30695.6 Da PI: 8.7429 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cotton_A_02500_BGI-A2_v1.0 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 100 | 1.5e-31 | 12 | 66 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+rlrWt+eLH+rF +av+qLGG+++AtPk il++m+v+gLt++hvkSHLQk+R+
Cotton_A_02500_BGI-A2_v1.0 12 KERLRWTQELHDRFEQAVNQLGGPDRATPKGILKAMGVDGLTIYHVKSHLQKFRI 66
68****************************************************6 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 271 aa
Download sequence Send
to blast |
MRRPSRADGL AKERLRWTQE LHDRFEQAVN QLGGPDRATP KGILKAMGVD GLTIYHVKSH 60
LQKFRILKFV PETNTSKLKQ PYLRGEIFQK YCLILVQHRA QLNEALQLYM EAQRKQGDDK 120
LQVRRNLKIK FEAQARYFER IAGEHRNRVT PTKATKSLSP ISLPSLCEES ESNSKDFETD 180
PEADKNEIES GERIQALKRA GIVEDNSASS SSSSSSSSMY ALPSSFSADG YEYDDQNMLL 240
NGGERLSYTA NDNSFPWNIP VCSSPLVPSF M
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 2e-21 | 11 | 69 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 2e-21 | 11 | 69 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 1e-21 | 12 | 69 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 1e-21 | 12 | 69 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 1e-21 | 12 | 69 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 1e-21 | 12 | 69 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 2e-21 | 11 | 69 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 2e-21 | 11 | 69 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 2e-21 | 11 | 69 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 2e-21 | 11 | 69 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 2e-21 | 11 | 69 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 2e-21 | 11 | 69 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HQ527636 | 1e-109 | HQ527636.1 Gossypium herbaceum clone NBRI_B_EYI1BW404IW7BW simple sequence repeat marker, mRNA sequence. |
