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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_02007_BGI-A2_v1.0 |
Common Name | F383_16143 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
GATA |
Protein Properties |
Length: 376aa MW: 41499.2 Da PI: 6.8233 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_02007_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 58.7 | 7.5e-19 | 292 | 326 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
Cs+Cg+tkTp+WR gp g ktLCnaCG+++++ +l
Cotton_A_02007_BGI-A2_v1.0 292 CSHCGVTKTPQWRAGPMGVKTLCNACGVRFKSGRL 326
*******************************9986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 376 aa
Download sequence Send
to blast |
MDAFYHHSML YQTHHHPFFF KFPPLASTTP LLLSSSLQEM ECVEAALKTS FRKEMALKSS 60 PQAFLEDIWV VNNGQNGVSC DDFSVDDLFD FTHEEGFLEQ QNEDEEEQVP VSSSHKRQKL 120 SQEHHFSNDT INFDYSSLST DELAVPAEDV ANLEWLSHFV EDSFSEHSAA AYPAGTLTEK 180 PKLPDNKLPK PEKPVATCFK TRVPGKARSK RSRTGGRVWC LGASPPFTES SSSSSSSSSS 240 SPSASSPWFL CSNSGSGSTL ELSESLSMEK KHKKRPATES TIGNGTQPTR RCSHCGVTKT 300 PQWRAGPMGV KTLCNACGVR FKSGRLLPEY RPACSPTFSS ELHSNHHRKV LEMRRQKEAS 360 GEAEPGSVPT SVPSFG
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity). {ECO:0000250}. |