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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_01957_BGI-A2_v1.0 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
ERF |
Protein Properties |
Length: 218aa MW: 24244.9 Da PI: 9.9224 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_01957_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.1 | 6.1e-20 | 45 | 94 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp + + +r++lg+f tae Aa a+++a+++++g
Cotton_A_01957_BGI-A2_v1.0 45 HYRGVRQRP-WGKWAAEIRDP---N-KaARVWLGTFATAEAAAIAYDEAALRFKG 94
69*******.**********9...3.35***********************9987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 218 aa
Download sequence Send
to blast |
MIQALTHVIG NDNDNNNPLL VQLHHHNQYQ YQSQHQPQGN VRRIHYRGVR QRPWGKWAAE 60 IRDPNKAARV WLGTFATAEA AAIAYDEAAL RFKGSKAKLN FPERVQRSSG SGYLTISHVV 120 ERVPPPLPPR HSQPTFPNIS DDQLLSGGSN GGEAVSRPAF TSQYPTTLSS SSSSTTLTSK 180 LQQEDLGGFL LKNIGGSSPS SDPPKNKRQC YDYYYSRE
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator of cell proliferation and axillary bud outgrowth. Involved in maintaining the structure of the shoot apical meristem as well as plastochron and phyllotaxy. Activates several genes involved in cell cycle regulation and dormancy breaking, including CYCD3-3, DPA, and BARD1. Strongly down-regulates DRM1, DRMH1, MARD1 and several genes encoding different types of cell wall-remodeling proteins. {ECO:0000269|PubMed:23616605}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Transiently up-regulated 6 to 15 hours after decapitation. {ECO:0000269|PubMed:23616605}. |