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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_01678_BGI-A2_v1.0 |
Common Name | F383_26303 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
G2-like |
Protein Properties |
Length: 353aa MW: 40313.3 Da PI: 6.5299 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_01678_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 103.8 | 1e-32 | 225 | 280 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+peLH+rFvea+++LGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+
Cotton_A_01678_BGI-A2_v1.0 225 KQRRCWSPELHKRFVEALQKLGGSKVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 280
79****************************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 353 aa
Download sequence Send
to blast |
MELNMDVDLV YVPETVSEFL KQASKIKNGF QRLCKISDYV RRLEDEMKKI DAFKRELPLC 60 MLLLKDVIKR LKEEEMMCKE LGDGSVTIDE GNGKVNKEND GGAGDKRNWR STVQLWNSDS 120 DNVDQNKKPN KVPRLKLRSE EEEEEEQDMF EDPIEFFNNK RFKGQMDKDN LELSLMTPSF 180 DLGSSSPSHN PILKINDNCK TGFGSDQNQT KFQTKHQQDM QNCKKQRRCW SPELHKRFVE 240 ALQKLGGSKV ATPKQIRELM QVDGLTNDEV KSHLQKYRLH FRKVASDSSA QNQCNEKMKA 300 NISESDSPQG PLRAGGWTKG LSSGGSVVEG EDDEKSDGRS WRSGVTKTGE IEH
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4r_A | 6e-15 | 225 | 278 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 6e-15 | 225 | 278 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 6e-15 | 225 | 278 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 6e-15 | 225 | 278 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JQ837700 | 0.0 | JQ837700.1 Gossypium hirsutum cultivar ZM3 MYB mRNA, complete cds. |