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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_01669_BGI-A2_v1.0 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
B3 |
Protein Properties |
Length: 244aa MW: 27432.2 Da PI: 10.1317 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_01669_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 57.3 | 2.9e-18 | 129 | 205 | 11 | 87 |
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr 87
++ +rl+++ kf+++h +k+++s +t ++sg++W v++++ ++k++ vl++GW Fv++n++++gD++ F+l+++
Cotton_A_01669_BGI-A2_v1.0 129 SRGCRLTISAKFVRKHLMKEHCS--MTRCNSSGKTWIVTFKHnqTGKKQISVLRAGWGTFVRDNNIQAGDVCAFELINS 205
455*************8898897..6666*******99998854555555*************************9975 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 244 aa
Download sequence Send
to blast |
MSSPASSGSH LVQYDGNSNF HVIIFDRTAS EIQYPYTSNN QRQSNEIPKQ NINESKTECN 60 GKSGFLAQQV SHNGCPAVKG DKRTNHPVIQ RMKGREKVKT LEKAINTFKS KNPFFLVVMQ 120 PYYVGLGHSR GCRLTISAKF VRKHLMKEHC SMTRCNSSGK TWIVTFKHNQ TGKKQISVLR 180 AGWGTFVRDN NIQAGDVCAF ELINSIQISF KVVIYECQHT NCHQSFASTD VFRSVKGEAL 240 SYAS
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