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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_01491_BGI-A2_v1.0 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
Dof |
Protein Properties |
Length: 303aa MW: 33642.8 Da PI: 7.0123 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_01491_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 127.3 | 4.6e-40 | 51 | 111 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
+e+alkcprC+st+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+
Cotton_A_01491_BGI-A2_v1.0 51 HEQALKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVV 111
7899******************************************************975 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 303 aa
Download sequence Send
to blast |
MGLTSLRVCM DSSDWLQGTM HEESEMDSSS LSGDMLTCSR PLVERRLRPQ HEQALKCPRC 60 ESTHTKFCYY NNYSLSQPRY FCKTCRRYWT KGGTLRNIPV GGGCRKNKKV VSKKPNTESS 120 NSNNNVVGSS NAHHHNPTHL HLSFPEMHLN NLLATHHAAD GNFIGGNKYN SLLGNPMPID 180 FMESKLEAIV GSSRNYDFMG NGNEMGLVEG VGDMGLAPNL HGLCSPYGMS TIDGTGGGFM 240 MLPYDTNEDQ QHAIDVKPNN KLLSLEWKDQ GYPDAGKDSY GYMNSLGSWP GVMNIMDPPQ 300 QIH
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity). Promotes expression (PubMed:19915089). The PEAR proteins (e.g. DOF2.4, DOF5.1, DOF3.2, DOF1.1, DOF5.6 and DOF5.3) activate gene expression that promotes radial growth of protophloem sieve elements (PubMed:30626969). Involved in the regulation of interfascicular cambium formation and vascular tissue development, particularly at a very early stage during inflorescence stem development; promotes both cambium activity and phloem specification, but prevents xylem specification (PubMed:19915089). {ECO:0000250|UniProtKB:Q9M2U1, ECO:0000269|PubMed:19915089, ECO:0000269|PubMed:30626969}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HQ650106 | 0.0 | HQ650106.1 Gossypium hirsutum clone BAC 067L14, complete sequence. |