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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_00772_BGI-A2_v1.0 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
B3 |
Protein Properties |
Length: 170aa MW: 19629.5 Da PI: 9.5816 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_00772_BGI-A2_v1.0 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 38.5 | 2.1e-12 | 88 | 152 | 17 | 84 |
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84
++p +fa++ ++ e++k+ t+ ++ W+v + + v++ GW +Fv++n++k+g ++vF+l
Cotton_A_00772_BGI-A2_v1.0 88 SVPSSFAKAQYLP-ETKKEFTFSATKQGYWKVGF--VCSEMDKVFSHGWCKFVRDNEMKVGNTCVFEL 152
89*****877666.5668****************..55555589***********************6 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 170 aa
Download sequence Send
to blast |
MDLRLCLHRQ KKMRSSTKDL NSNIPNHDNR PSFFKLITHD TNANHSWIFD KTGVERETGP 60 MTGKHRGFSV EIKEEDDANR KNTPCPPSVP SSFAKAQYLP ETKKEFTFSA TKQGYWKVGF 120 VCSEMDKVFS HGWCKFVRDN EMKVGNTCVF ELWLLKKSKP IFSTSMICNV
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JX610548 | 5e-62 | JX610548.1 Gossypium hirsutum clone NBRI_GE52301 microsatellite sequence. |