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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Cotton_A_00525_BGI-A2_v1.0 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
ERF |
| Protein Properties |
Length: 190aa MW: 20257.7 Da PI: 6.2587 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cotton_A_00525_BGI-A2_v1.0 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 58 | 2.4e-18 | 33 | 83 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+ ykGVr++ +g+Wv+eIr+p r +r++lg+f t+e+Aa a++ a+++l+g
Cotton_A_00525_BGI-A2_v1.0 33 PVYKGVRRRA-NGKWVSEIREP-----RkpTRIWLGTFPTPEMAAIAYDVAALALKG 83
68*****887.8*********9.....448************************998 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0050832 | Biological Process | defense response to fungus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 190 aa
Download sequence Send
to blast |
MQYYNKGYSK CITMQYNKGS SSGGGSAATG RHPVYKGVRR RANGKWVSEI REPRKPTRIW 60
LGTFPTPEMA AIAYDVAALA LKGPHAELNF PNSAASLPVP ASTSPTDIQA AATSAATALG 120
AANDALVGSN NPVSAERPST GNDFVDEDMM FDMPNVLVNM AEGMLLSPPR FDHPPPADDS 180
GDSENLWKFP
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
