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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Cotton_A_00303_BGI-A2_v1.0 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
G2-like |
| Protein Properties |
Length: 340aa MW: 38503.9 Da PI: 9.2278 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cotton_A_00303_BGI-A2_v1.0 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 102.6 | 2.4e-32 | 57 | 110 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWtp+LH rFv+ave+LGG+++AtPk +lelm++kgL+++hvkSHLQ+YR+
Cotton_A_00303_BGI-A2_v1.0 57 PRLRWTPDLHLRFVHAVERLGGQDRATPKLVLELMNIKGLSIAHVKSHLQMYRS 110
8****************************************************7 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 340 aa
Download sequence Send
to blast |
MEENSGTGCS KTVKAETESE ENEGESRPKN GGSSSNSTVE ENEKKLSVRP YVRSKLPRLR 60
WTPDLHLRFV HAVERLGGQD RATPKLVLEL MNIKGLSIAH VKSHLQMYRS KKIDDSGQVI 120
SNHRHLVESG DRNIYNLSQL PMLQGYSNLL HHHHHQGDSS SSFYRYGDAS LGNREYSMRR 180
PYTSTSFINE SRPGLHRTVT EKIFSSNWAS YDFKCNQVQP RLGPIETSSM SQNTSLSIHN 240
SPLISQDLKS TKRKTFDCDL DLDLSLRITA KEDKQPNSEQ GDVVSELSLS LYSPSSSSSK 300
LSRLKSEEDH CTKKNARRVH RLLSVWSCNL VYSSLSREGY
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 2e-16 | 58 | 112 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 2e-16 | 58 | 112 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 2e-16 | 58 | 112 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 2e-16 | 58 | 112 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 2e-16 | 58 | 112 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 2e-16 | 58 | 112 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 2e-16 | 58 | 112 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 2e-16 | 58 | 112 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 2e-16 | 58 | 112 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 2e-16 | 58 | 112 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 2e-16 | 58 | 112 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 2e-16 | 58 | 112 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | GQ394941 | 1e-125 | GQ394941.1 Gossypium hirsutum cultivar Delta Opal clone MONCS1964 SSR marker DPL0302 genomic sequence. |
