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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cla023471 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
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Family |
NAC |
Protein Properties |
Length: 411aa MW: 46592.5 Da PI: 6.3443 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cla023471 | genome | ICuGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 170.7 | 4.6e-53 | 21 | 148 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99
lppGfrFhPtdeel+++yL+ kv + ++ i+evd++++ePw+Lp +k +e+ewyf+s rd+ky+tg r+nrat +gyWkatgkd+ev+s+ +g+l
Cla023471 21 LPPGFRFHPTDEELITFYLASKVFKGSFCG-VEIAEVDLNRCEPWELPDVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSAsNGSL 119
79*************************777.45***************8888899**************************************9978899 PP
NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
g+kktLvfykgrap+gekt+Wvmheyrl
Cla023471 120 LGMKKTLVFYKGRAPRGEKTKWVMHEYRL 148
***************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010014 | Biological Process | meristem initiation |
GO:0010199 | Biological Process | organ boundary specification between lateral organs and the meristem |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 411 aa
Download sequence Send
to blast |
MLAMEQILSE LNGEELNEQG LPPGFRFHPT DEELITFYLA SKVFKGSFCG VEIAEVDLNR 60 CEPWELPDVA KMGEREWYFY SLRDRKYPTG LRTNRATGAG YWKATGKDRE VYSASNGSLL 120 GMKKTLVFYK GRAPRGEKTK WVMHEYRLDG DFSYRHACKE EWVICRIFHK NGEKKNPLFQ 180 CQTYLLESAL SSSTTSNSLP PLLESTPTTT LVECQSQAAM QAFQNPFQIQ QPHENDLKRF 240 MSSVVSQSNL LSSSEQPHKS PISINPIDNA NNNMLLYTSS PSILFKSLLS HQDSTVVLKQ 300 QQQQCDHVFK QFNKAAEASF TAHNFEPGEA EANSNFMDIK KMMQPNAPPS SYHQHPLFFE 360 MECNSPTAVA ADVSLHDIST SIAFNRPAYQ TMLDPHINIL HAHGESWPLD A
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
3swm_A | 6e-51 | 14 | 170 | 13 | 168 | NAC domain-containing protein 19 |
3swm_B | 6e-51 | 14 | 170 | 13 | 168 | NAC domain-containing protein 19 |
3swm_C | 6e-51 | 14 | 170 | 13 | 168 | NAC domain-containing protein 19 |
3swm_D | 6e-51 | 14 | 170 | 13 | 168 | NAC domain-containing protein 19 |
3swp_A | 6e-51 | 14 | 170 | 13 | 168 | NAC domain-containing protein 19 |
3swp_B | 6e-51 | 14 | 170 | 13 | 168 | NAC domain-containing protein 19 |
3swp_C | 6e-51 | 14 | 170 | 13 | 168 | NAC domain-containing protein 19 |
3swp_D | 6e-51 | 14 | 170 | 13 | 168 | NAC domain-containing protein 19 |
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