PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cla021063 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
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Family | NAC | ||||||||
Protein Properties | Length: 460aa MW: 52592.7 Da PI: 5.1513 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 124.8 | 7.1e-39 | 13 | 135 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 p GfrF+Pt+eel+++yLk+k+ g++ + + i+e+d+yk+ePw+Lp + +++++ ew+fF + + +++r+t +g W++tg d++++++ +++ Cla021063 13 PIGFRFRPTEEELITHYLKNKILGHESLV-QYIREIDLYKYEPWELPeQsLFESDNYEWFFFRAHTS------KTKRTTGNGGWRTTGDDRPIKARgTNK 105 89************************777.88**************954344555559999988766......5789******************96677 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 ++ ++k+Lvfy+gr+++++kt+Wv+hey+l Cla021063 106 VIATRKILVFYEGRSSDAVKTNWVIHEYHL 135 89***************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 8.11E-45 | 7 | 153 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 45.433 | 12 | 155 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.4E-22 | 13 | 135 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 460 aa Download sequence Send to blast |
MASFTFPPHY LWPIGFRFRP TEEELITHYL KNKILGHESL VQYIREIDLY KYEPWELPEQ 60 SLFESDNYEW FFFRAHTSKT KRTTGNGGWR TTGDDRPIKA RGTNKVIATR KILVFYEGRS 120 SDAVKTNWVI HEYHLHPDRN IPYQRQFVVC RLKENAEEID VSTCDQDRQT SSVASHLKKK 180 GTQRPIQVAL KQMGNRSFSP CGIPHDNLLW XXXXXXQLAL ADFPSVNVNM QPIQAPPSEN 240 AVSLTEILNS IFVPDEYLDD ATSKMCESPW CSEPEPALMD FQLSSDNDGE VNNQLLQPKA 300 SKTELNFSEL LLNSVLVEDE NCDEVTSNNG IDSYNEEELE RMVYELQADI CRSDTDTDTT 360 FGFPAKEDEK HIEIVDLPQL SVTHSNNELK GEAGNKATKS GVSCCGSIGS TRNSFSYILT 420 TKRIDHKSSL PVIYVAKAFL GIIMLIMFAQ EVLLYRHSRR |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-32 | 13 | 135 | 16 | 140 | Stress-induced transcription factor NAC1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022144269.1 | 1e-136 | NAC domain-containing protein 62-like | ||||
TrEMBL | A0A1S3BM55 | 1e-112 | A0A1S3BM55_CUCME; NAC domain-containing protein 91-like | ||||
STRING | XP_008449087.1 | 1e-112 | (Cucumis melo) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF24834 | 3 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49530.1 | 1e-30 | NAC domain containing protein 62 |