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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cla020609 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
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Family |
LBD |
Protein Properties |
Length: 203aa MW: 22136 Da PI: 6.6517 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cla020609 | genome | ICuGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 92 | 7.1e-29 | 2 | 103 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95
+C++C+vlr++C++ Cvl+ + p++q +++ +++k+FG+s +l++++a+p ++r+++++sl++eA+ r+ +Pv+Gavg++ +++++++q++a+++
Cla020609 2 SCNGCRVLRKGCSETCVLRSSLhwidsPEAQGNATLFLAKFFGRSDLLSFISAVPYHQRPALFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTV 101
6***********************************************************************************************9987 PP
DUF260 96 ll 97
l
Cla020609 102 LN 103
65 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 203 aa
Download sequence Send
to blast |
MSCNGCRVLR KGCSETCVLR SSLHWIDSPE AQGNATLFLA KFFGRSDLLS FISAVPYHQR 60 PALFQSLLFE ACGRTVNPVS GAVGLLYSGN WHVCQAAADT VLNGGVLRPI PGIESSGNPI 120 PNVDDSALTF NTDVWTTTTH NLQFYPSTPS DFRCLPDLAL GRAKNHPLEN RRSLDSEESV 180 MTSFGSGDLG DQRKETKLLN LFV
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