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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cla020582 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
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Family |
GRAS |
Protein Properties |
Length: 468aa MW: 52537.3 Da PI: 5.3748 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cla020582 | genome | ICuGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 448.3 | 5.1e-137 | 48 | 462 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
l++lLl+cA+ v+ g+ e+a+ L+++s+laspdgd+mqR+aayfteALa r+++s+++l kal++++ ++ ee+ a++lf+e++P+lk++++++Nq
Cla020582 48 LIHLLLACANQVAIGNIENANVGLEQISHLASPDGDTMQRIAAYFTEALADRILKSWPGLHKALNSTKIL--SVPEEILAQRLFFELCPFLKLAYVITNQ 145
689*************************************************************988887..59************************** PP
GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgE 200
aI ea+ege+++HiiDf +++QW++Llq+L +Rp+gpp+lRiTg+++ +ke le+++ rL++ Ae+ ++pf+f++ v+++le+l+le+L+vk+gE
Cla020582 146 AIIEAMEGERMIHIIDFKSCEPAQWINLLQTLKDRPDGPPHLRITGIHE----QKEVLEQMALRLTEEAEKWDIPFQFTP-VVSKLENLDLESLKVKTGE 240
*************************************************....9**************************.799**************** PP
GRAS 201 alaVnlvlqlhrll.....................................................desvsleserdevLklvkslsPkvvvvveqead 247
alaV++vl+lh++l + s+ + +++L ++++lsPkv+v++eqe++
Cla020582 241 ALAVSSVLELHSVLatdddkktspsasknlqkllrmkqrtlgewletdslqvfgspdsasvsspsglNPSQ----KMNSFLTALWGLSPKVMVITEQESN 336
*********************************************************99998644433333....5667********************* PP
GRAS 248 hnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksd 347
+n++ F+er+leal++y+alfd+le++++r s er+ vE++llg+ei+n++aceg er+erhe+le+W rle++GF++vpls++ + ++ll+ ++ d
Cla020582 337 LNGSAFMERVLEALNFYAALFDCLESTVSRSSIERQRVEKMLLGEEIKNIIACEGVERTERHEKLERWILRLESVGFGKVPLSYHSMLLGSRLLQSYGYD 436
**************************************************************************************************** PP
GRAS 348 gyrveeesgslvlgWkdrpLvsvSaW 373
gy+++ee+g l+++W+drpL+svSaW
Cla020582 437 GYKIKEENGFLFICWQDRPLFSVSAW 462
************************** PP
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Sequence ? help Back to Top |
Protein Sequence Length: 468 aa
Download sequence Send
to blast |
MAGMFNGEGS SSVTSSPLQF FPWSLSPGIG SPYPFLRELK SEERGLCLIH LLLACANQVA 60 IGNIENANVG LEQISHLASP DGDTMQRIAA YFTEALADRI LKSWPGLHKA LNSTKILSVP 120 EEILAQRLFF ELCPFLKLAY VITNQAIIEA MEGERMIHII DFKSCEPAQW INLLQTLKDR 180 PDGPPHLRIT GIHEQKEVLE QMALRLTEEA EKWDIPFQFT PVVSKLENLD LESLKVKTGE 240 ALAVSSVLEL HSVLATDDDK KTSPSASKNL QKLLRMKQRT LGEWLETDSL QVFGSPDSAS 300 VSSPSGLNPS QKMNSFLTAL WGLSPKVMVI TEQESNLNGS AFMERVLEAL NFYAALFDCL 360 ESTVSRSSIE RQRVEKMLLG EEIKNIIACE GVERTERHEK LERWILRLES VGFGKVPLSY 420 HSMLLGSRLL QSYGYDGYKI KEENGFLFIC WQDRPLFSVS AWGFHRQS
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |