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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cla019304 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
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Family |
NAC |
Protein Properties |
Length: 244aa MW: 27549.7 Da PI: 5.9034 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cla019304 | genome | ICuGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 102.8 | 4.5e-32 | 4 | 149 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvka..eekewyfFskrdkkyatgkrknra.........tksgyWkatgk 88
lppGfrF+Pt+eelv eyLk kv ++ l++ ++i+e+ ++ +++Pwd+p+ + + +e+e y Fsk+d +++ + ++ +sgyWka
Cla019304 4 LPPGFRFEPTEEELVFEYLKCKVFSSALPA-SIIPEIdGVWNLDPWDIPTGAGGggREEEKYIFSKKDAEAEAEAEEYNNndnmgivgwSRSGYWKARRW 102
79****************************.88****669*********543332266688******998875544433335678888888********* PP
NAM 89 dkevlsk..kgelvglkktLvfy.....kgrapkgektdWvmheyrl 128
+ke++s+ + l+g+kktL f +g+++k++kt Wvmheyrl
Cla019304 103 EKEIVSSeiGVPLMGMKKTLDFCsigssSGSKRKTKKTGWVMHEYRL 149
******8555566**********8888779***************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 244 aa
Download sequence Send
to blast |
MRGLPPGFRF EPTEEELVFE YLKCKVFSSA LPASIIPEID GVWNLDPWDI PTGAGGGGRE 60 EEKYIFSKKD AEAEAEAEEY NNNDNMGIVG WSRSGYWKAR RWEKEIVSSE IGVPLMGMKK 120 TLDFCSIGSS SGSKRKTKKT GWVMHEYRLQ LQPHYSYSNN TNTNTNTNLE NNKWVLCRIF 180 CNKFNDDHII QRRLHYSISS TNHQDHLLSI TPNALSDDDD SVSSTASSSS TSAATIPNHP 240 FPPF
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-21 | 4 | 180 | 17 | 163 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-21 | 4 | 180 | 17 | 163 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-21 | 4 | 180 | 17 | 163 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-21 | 4 | 180 | 17 | 163 | NO APICAL MERISTEM PROTEIN |
4dul_A | 1e-21 | 4 | 180 | 17 | 163 | NAC domain-containing protein 19 |
4dul_B | 1e-21 | 4 | 180 | 17 | 163 | NAC domain-containing protein 19 |
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