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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cla018410 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
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Family |
NAC |
Protein Properties |
Length: 262aa MW: 30395.2 Da PI: 6.2571 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cla018410 | genome | ICuGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 144.5 | 5.9e-45 | 6 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
lppGfrF Pt+eelv++yL +k+eg + ++++i+ +diy+++PwdLpk ++k +e++w+fF++r++++a+g r++r+t+sgyWkatg+ + v
Cla018410 6 LPPGFRFYPTEEELVSFYLYHKLEGGRedlnGVVDQIIPVLDIYQFNPWDLPKfageACKRDEEQWFFFIPRQESEARGGRPKRVTTSGYWKATGSPTYV 105
79************************956532234479999***********656766666888************************************ PP
NAM 93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+s+ +++ +g+k+++vfy+grapkg kt+W m+ey+l
Cla018410 106 YSSnNQKSIGVKRSMVFYNGRAPKGIKTQWKMNEYKL 142
*9967778***************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 262 aa
Download sequence Send
to blast |
MGDCNLPPGF RFYPTEEELV SFYLYHKLEG GREDLNGVVD QIIPVLDIYQ FNPWDLPKFA 60 GEACKRDEEQ WFFFIPRQES EARGGRPKRV TTSGYWKATG SPTYVYSSNN QKSIGVKRSM 120 VFYNGRAPKG IKTQWKMNEY KLIAHPFPST TIPKLSLCRI YKKSKLVRAF DRRPPQPQIE 180 APIPMELTTS LHDDVGDQFV DDQKLLNPPI MATERPNSPE SFNYSSEDHH GESSTNNNNV 240 QLKMEVDNNE LVWDWNHLNW LE
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-38 | 1 | 163 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-38 | 1 | 163 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-38 | 1 | 163 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-38 | 1 | 163 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-38 | 1 | 163 | 15 | 168 | NAC domain-containing protein 19 |
3swm_B | 1e-38 | 1 | 163 | 15 | 168 | NAC domain-containing protein 19 |
3swm_C | 1e-38 | 1 | 163 | 15 | 168 | NAC domain-containing protein 19 |
3swm_D | 1e-38 | 1 | 163 | 15 | 168 | NAC domain-containing protein 19 |
3swp_A | 1e-38 | 1 | 163 | 15 | 168 | NAC domain-containing protein 19 |
3swp_B | 1e-38 | 1 | 163 | 15 | 168 | NAC domain-containing protein 19 |
3swp_C | 1e-38 | 1 | 163 | 15 | 168 | NAC domain-containing protein 19 |
3swp_D | 1e-38 | 1 | 163 | 15 | 168 | NAC domain-containing protein 19 |
4dul_A | 1e-38 | 1 | 163 | 12 | 165 | NAC domain-containing protein 19 |
4dul_B | 1e-38 | 1 | 163 | 12 | 165 | NAC domain-containing protein 19 |
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