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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cla016907 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
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Family |
Trihelix |
Protein Properties |
Length: 395aa MW: 44871.7 Da PI: 9.4844 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cla016907 | genome | ICuGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 61.5 | 2e-19 | 59 | 155 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgk............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
Wt qe++ Li+a++ ++er ++++ + +W++v ++++++g++rs++qC++kw+nl ++ykk++e e++ +++ ++p + ++e
Cla016907 59 WTLQETMILITAKKLDDERRNKANlgptstdpaarkGGELRWKWVENYCWSHGCQRSQNQCNDKWDNLLRDYKKVREYESRACDQQPPQIPSYWKME 155
**************99999998866666677776557799*****************************************99999999*****998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 395 aa
Download sequence Send
to blast |
MSDPPTASSE PPHHHHHHQQ LLHLPVIHGG ASGGAVRMNT AAATSSSTVI VREYRKGNWT 60 LQETMILITA KKLDDERRNK ANLGPTSTDP AARKGGELRW KWVENYCWSH GCQRSQNQCN 120 DKWDNLLRDY KKVREYESRA CDQQPPQIPS YWKMEKHERK DKNLPSNMAF EVYQALNDVV 180 QRKFSQRPSN STTTGLLLLP PPSALPPPPP PQSTATNSPP LSESSSSGTE SSDRKKKEKM 240 ETKRRKMGDN IGRSIERSVS ALAQTLHNCE EQREIRHQQL MELQKRRLQI EETRNHIHRQ 300 GIADLVTAVA NLSAGINNRT SRLEGYGCLY SGEEVRMLKE QNEAMQAELM NVKSELSQLR 360 DQMPSLMQTM MHNMIHNIPP PPPPSTSSMK VDMAW
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