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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Cla016849 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
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| Family |
NF-YA |
| Protein Properties |
Length: 300aa MW: 32854.4 Da PI: 8.362 |
| Description |
NF-YA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cla016849 | genome | ICuGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | CBFB_NFYA | 103 | 2.8e-32 | 155 | 211 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
d p+YVNaKQy++Il+RRq+Rakle+++k+ +++rkpylheSRh hAl+R RgsgGrF
Cla016849 155 DGPIYVNAKQYHGILRRRQSRAKLEAQNKV-IRNRKPYLHESRHLHALNRVRGSGGRF 211
57****************************.**************************9 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0016602 | Cellular Component | CCAAT-binding factor complex |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 300 aa
Download sequence Send
to blast |
MTMTLSDNIS LKLETPPKPH HKQLGVGLQL PDQESSTAHS IGQSLHRVCA MEVQNAQEQC 60
ISSESGQDEN CGESVENQLK PAILFSNPEF MFNSLQVDGS HSMTRVSYPY IDPYYGGLLC 120
GGYSQQGFNS QAQVNPNAVG TAPARVPISY GLAEDGPIYV NAKQYHGILR RRQSRAKLEA 180
QNKVIRNRKP YLHESRHLHA LNRVRGSGGR FLSVKKNQPS DRTNPPTTLC QQKSTPDSNT 240
YSPETGDHGT MTATCSEITS ISNGSVMFGW SDSQFSAASS NASGRMEQYR GRYVHGGNGT
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