PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla014803
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family bZIP
Protein Properties Length: 435aa    MW: 47901.1 Da    PI: 6.5143
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla014803genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.58.2e-15247301357
                XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                + +r+rr+ +NRe+ArrsR+RK+a + eLe+ v +L  e ++L k+l   +++++
  Cla014803 247 DARRARRMLSNRESARRSRRRKQAHLNELETQVGQLRVEHSTLLKRLTDVNQKYD 301
                679*****************************************99999988876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.2E-11244300No hitNo description
SMARTSM003388.6E-18245309IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.07247301IPR004827Basic-leucine zipper domain
PfamPF001703.7E-12248301IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.19E-11249299No hitNo description
PROSITE patternPS000360252267IPR004827Basic-leucine zipper domain
PfamPF124981.6E-12316414IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
MHTFFSSEDL SDNSFWPPQP AASSSPPSHS PFRSPDPSLT MNRSASEWAF ERFLEEVSAL  60
PVNSCPSTTS DRVPVSPVDV ASPASQSSTS KRDEGDDEIV EIKKADCDHD RSQPIPSSDP  120
SKMVRSSSDR YRVFLKNQLD MACAAVALSR AASLEPKGPV QPADHRGQSS NAFQFGMQAP  180
GQGSDRGTST KESEVSGSPL GIPSLPTMPK KLGVQPAQTT SGSSRDESDD DDLEGDIENI  240
ENMDPADARR ARRMLSNRES ARRSRRRKQA HLNELETQVG QLRVEHSTLL KRLTDVNQKY  300
DDAAVDNRIL KADIETLRAK VKMAEETVKR VTGVNPLLVA MSQTQMPFVN NQMPMQSNTQ  360
FFHQNMSAFA NSPPHHHNLE PPPIPHVGRS QNDVATKISD MPSVHIDHVQ KQAMHGPLSA  420
WDAEPPHSTP NHKKN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1261268RRSRRRKQ
2263268SRRRKQ
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818030.0LN681803.1 Cucumis melo genomic scaffold, anchoredscaffold00026.
GenBankLN7132550.0LN713255.1 Cucumis melo genomic chromosome, chr_1.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011659270.10.0PREDICTED: light-inducible protein CPRF2-like
TrEMBLA0A0A0K5J30.0A0A0A0K5J3_CUCSA; Uncharacterized protein
STRINGXP_004162189.10.0(Cucumis sativus)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF136911825
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02640.21e-36bZIP family protein