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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Cla014559 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
|
| Family |
SRS |
| Protein Properties |
Length: 272aa MW: 29579.9 Da PI: 6.8451 |
| Description |
SRS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cla014559 | genome | ICuGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF702 | 100.3 | 3.5e-31 | 95 | 156 | 5 | 66 |
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaas 66
+sCqdCGnqakkdC+++RCRtCCksrgf+C+thvkstWvpa+krr+r+ + a++ k+ ++
Cla014559 95 VTSCQDCGNQAKKDCVYMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRCLASNPKRPKD 156
469*********************************************76666655555544 PP
|
| 2 | DUF702 | 83.8 | 4.1e-26 | 161 | 219 | 97 | 155 |
DUF702 97 kkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGleek 155
++ le+ ++P ev+s+avfrcvr++++d+ ++++aYqtav+igGh+fkGiLyd+G+e++
Cla014559 161 SSGLEMGNFPVEVNSTAVFRCVRMTTLDETNDQYAYQTAVNIGGHIFKGILYDHGPEQQ 219
45678889************************************************985 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 272 aa
Download sequence Send
to blast |
MAGFFPLGGA GSSGRGSNYH LPTTTTSITT SGGEIIHPNE GLFWYKNYER LETWEEQQQP 60
QEQGGEGFVY SGDESPARSS LVMVRSGRGG GGGHVTSCQD CGNQAKKDCV YMRCRTCCKS 120
RGFECETHVK STWVPASKRR DRHLRCLASN PKRPKDNPAA SSGLEMGNFP VEVNSTAVFR 180
CVRMTTLDET NDQYAYQTAV NIGGHIFKGI LYDHGPEQQL QQQPPTSASP DASALLITTA 240
ESAALLDPPP QYPTPLSTYI ATGTQFFLPP TS
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371, PubMed:24142382). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371, PubMed:24142382). Acts synergistically with MYC1 in the transactivation of TPS5 (PubMed:24884371). {ECO:0000269|PubMed:24142382, ECO:0000269|PubMed:24884371}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | LN682015 | 7e-87 | LN682015.1 Cucumis melo genomic scaffold, unanchored_scaffold00177. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT3G51060.1 | 4e-59 | Lateral root primordium (LRP) protein-related |
