PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Cla014048

Organism

Citrullus lanatus

Taxonomic ID

3654

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus

Family

bZIP

Protein Properties

Length: 217aa MW: 25283.3 Da PI: 7.6375

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cla014048	genome	ICuGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.4	1.2e-11	95	140	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++ rr+++NRe+ArrsR RK++ +e+L++ v +L+ eN++L ++l Cla014048 95 RKRRRMESNRESARRSRMRKQKHLENLRNLVNKLKVENRELSNRLR 140 57899************************************96664 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	6.8E-9	89	139	No hit	No description
SMART	SM00338	9.4E-14	91	155	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.174	93	156	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.3E-8	95	140	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.83E-9	95	143	No hit	No description
CDD	cd14702	9.47E-18	96	140	No hit	No description
PROSITE pattern	PS00036	0	98	113	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence Send to blast
MLSTFPTASA YESMLENPFP AVNGTSTPWE CHDHDHDPEF LPVVSQMTEP TGLFDVFHSP 60 NPVISSSSSE NRDEPEPMDA GPCAPDRKVE VIDERKRRRM ESNRESARRS RMRKQKHLEN 120 LRNLVNKLKV ENRELSNRLR FTVYEVNRVR TENDHLQTEH TILRQKLSYS RQVLIFRQFQ 180 RQLAFASPYS ALEQPPTISQ SQSQYILNNN NNNLINC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	94	98	RKRRR
2	94	115	RKRRRMESNRESARRSRMRKQK
3	107	114	RRSRMRKQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022950362.1	1e-106	bZIP transcription factor RISBZ2-like
TrEMBL	A0A0A0KJR4	1e-101	A0A0A0KJR4_CUCSA; Uncharacterized protein
STRING	XP_008440425.1	1e-107	(Cucumis melo)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5435	32	54

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22850.2	2e-30	basic leucine-zipper 6