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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Cla014015 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
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| Family |
LBD |
| Protein Properties |
Length: 235aa MW: 25946.2 Da PI: 7.6999 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cla014015 | genome | ICuGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 97.1 | 1.8e-30 | 2 | 103 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95
+C++C+vlr++C+++C+l+p++ +++q +++ +v+k+FG++ ++++++a+pe++r+ +++sl++eA+ r+ +Pv+Gavg++++++++++q++++++
Cla014015 2 SCNGCRVLRKGCSESCILRPCLqwidtAEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVDTV 101
6*********************9999777889***************************************************************99987 PP
DUF260 96 ll 97
l+
Cla014015 102 LR 103
75 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 235 aa
Download sequence Send
to blast |
MSCNGCRVLR KGCSESCILR PCLQWIDTAE AQGHATVFVA KFFGRAGLMS FISAVPESQR 60
PSLFQSLLFE ACGRTVNPVN GAVGLLWTGN WHVCQAAVDT VLRGGTLRPI NDFLAAGSPN 120
LASDDTSEAE VGCTDMWKIR DSYPNSRFSN SRSRLSPKRK RSEESSPKHQ LNDLDLRLTP 180
TFPAKSTLRA ATPSMNSEES ETTTCFESGL GDNHHQHQYY PEEGTTQRKL LNLFV
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