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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cla013390 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
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Family |
LBD |
Protein Properties |
Length: 161aa MW: 17928.2 Da PI: 4.8891 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cla013390 | genome | ICuGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 135.2 | 2.4e-42 | 7 | 106 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
+Ca+Ck+lrr+CakdC++apyfp+++p kfa+vhk+FGasnv+k+l+++p e+r da+ss+vyeA ar+rdPvyG+vg+i+ lq+++++l+ +l ++++e
Cla013390 7 PCASCKLLRRRCAKDCIFAPYFPSDDPFKFAIVHKIFGASNVSKMLQEVPIEQRADAVSSMVYEASARMRDPVYGCVGTISFLQNEVSRLEMQLGAAQAE 106
7********************************************************************************************9999876 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 161 aa
Download sequence Send
to blast |
MGAGSSPCAS CKLLRRRCAK DCIFAPYFPS DDPFKFAIVH KIFGASNVSK MLQEVPIEQR 60 ADAVSSMVYE ASARMRDPVY GCVGTISFLQ NEVSRLEMQL GAAQAEILTL HMQQQATPTT 120 FPTTTTHTDQ DDQNLVIFSN ADSSNSFHIF QEEGDYYPLW T
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